Skip to contents
uqsa
0.2.1
Get started
Installation
Short Instructions
Explanation for System Prerequisites
Documentation
Introduction
Uncertainty Quantification
Sensitivity Analysis
Model and data management
SBtab
Importing Models
Importing Data
Transformation Events
Build your own Model
Generate Model Code
Advantages of Intermediates
ODE Model
Paremeter estimation and uncertainty quantification
Simulating a Model
Sensitivity Analysis
Global Sensitivity Analysis
Examples
Overview
AKAR4
Simulate AKAR4 stochastically
Calibrate stochasic AKAR4
GSA on AKAR4
AKAP79
Multiple chains via MPI
CaMKII
Calibrate CaMKII with SMMALA
Extra
More examples...
Function reference
Changelog
More examples
extraExamples.Rmd
Here are some more examples:
Simulate AKAP79 deterministically and add noise
Simulate AKAP79 stochastically
Sample deterministic AKAP79 with ABC