makeGillespieModel interprets the provided SBtab file as a stochastic model

The SBtab file is assumed to describe a reaction network. The systems biology information is assumed to be concentrations and rate coefficients.

Usage

makeGillespieModel(m)

Arguments

m

list of data.frames, obtained via model_from_tsv()

LV

Avogadro's constant L multiplied by the system's volume V.

Value

a list containing the interpreted model.

Details

With the information provided with the rate coefficient units and a volume, this function tries to convert everything to Gillespie rate constants.