Default log-likelihood function, gradient

This returns a function g(x,simulations), which maps simulation results and the MCMC variables x to the gradient of log(likelihood) values withj respect to x. The experiments are used implicitly; simulations is a list as returned by rgsl::r_gsl_odeiv2_outer().

Usage

gradLogLikelihoodFunc(
  model,
  experiments,
  parMap = identity,
  parMapJac = function(x) {
     diag(1, length(x))
 }
)

Arguments

experiment

will be compared tp the simulation results